{"id":2559,"date":"2010-03-17T01:01:10","date_gmt":"2010-03-16T16:01:10","guid":{"rendered":"http:\/\/yasu2.prosou.nu\/blog\/index.php\/2010\/03\/17\/sgmj_2010_day_3\/"},"modified":"2010-03-17T01:01:10","modified_gmt":"2010-03-16T16:01:10","slug":"sgmj_2010_day_3","status":"publish","type":"post","link":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/2010\/03\/17\/2559\/","title":{"rendered":"SGMJ 2010: Day 3"},"content":{"rendered":"<p>[\u6b21\u4e16\u4ee3\u30b7\u30fc\u30b1\u30f3\u30b5\u306b\u3088\u308b\u65b0\u898f\u30de\u30e9\u30ea\u30a2\u539f\u866b\u30b2\u30ce\u30e0\u306e\u89e3\u8aad]<br \/>\n&#8211; P.falciparum (\u71b1\u5e2f\u71b1\u30de\u30e9\u30ea\u30a2)<br \/>\n&#8211; P.vivax (\u4e09\u65e5\u71b1\u30de\u30e9\u30ea\u30a2) \u85ac\u5264\u8010\u6027\u306e\u304c\u51fa\u73fe\u3002P.cynomolgi, P.knowlesi \u306a\u3069\u3001\u30a2\u30b8\u30a2\u30b5\u30eb\u30de\u30e9\u30ea\u30a2\u539f\u866b\u306b\u8fd1\u7e01\u3002\u809d\u81d3\u4f11\u7720\u671f\u304c\u3042\u3063\u3066\u6cbb\u7642\u304c\u56f0\u96e3\u3002\u672a\u719f\u306a\u8d64\u8840\u7403\u306b\u597d\u3093\u3067\u5bc4\u751f\u3059\u308b\u305f\u3081\u96e3\u57f9\u990a\u3002<br \/>\n&#8211; P.vivax \u30d2\u30c8<br \/>\n&#8211; P.knowlesi \u30b5\u30eb\u30fb\u30d2\u30c8  \u809d\u81d3\u4f11\u7720\u671f\u306a\u3057<br \/>\n&#8211; P.cynomolgi \u30b5\u30eb\u30fb\u30d2\u30c8 (P.vivax \u306b\u3082\u3063\u3068\u3082\u8fd1\u7e01)<br \/>\nP.cynomolgi \u3092\u8aad\u3093\u30673\u7a2e\u9593\u6bd4\u8f03\u30b2\u30ce\u30e0\u89e3\u6790\u3092\u9032\u3081\u3066\u3044\u308b\u3002<br \/>\n454FLX \u3068 GAII \u3068 Fosid. P.vivax \u3092\u30ea\u30d5\u30a1\u30ec\u30f3\u30b9\u3068\u3057\u3066\u30a2\u30bb\u30f3\u30d6\u30eb\u3002\u771f\u6838\u306a\u306e\u3067\u308f\u308a\u3068\u3057\u3093\u3069\u304f\u3001\u6b21\u4e16\u4ee3\u30b7\u30fc\u30b1\u30f3\u30b5\u3067\u306e\u771f\u6838\u306e\u65b0\u898f\u30b2\u30ce\u30e0\u89e3\u8aad\u306f\u304a\u305d\u3089\u304f\u65e5\u672c\u521d\u3002<br \/>\n\u4e88\u60f3\u30b2\u30ce\u30e0\u30b5\u30a4\u30ba 27Mbp \u3067\u3001\u73fe\u5728 22Mb \u3002Scaffold \u6570\u306f\u67d3\u8272\u4f53\u3068\u540c\u3058 14 \u672c\u306b\u306a\u3063\u3066\u3044\u308b\u3002<br \/>\n9\u5272\u306e\u907a\u4f1d\u5b50 (4649) \u306f3\u7a2e\u9593\u3067\u4fdd\u5b58\u3055\u308c\u3066\u3044\u308b\u3002<br \/>\n\u4fdd\u5b58\u3055\u308c\u3066\u306a\u3044\u907a\u4f1d\u5b50\u306f 1298. \u305d\u306e\u3046\u3061\u30a2\u30ce\u30c6\u30fc\u3068\u3055\u308c\u3066\u3044\u308b\u306e\u306f\u534a\u5206\u3067\u3001\u305d\u306e\u307b\u3068\u3093\u3069\u304c\u591a\u91cd\u907a\u4f1d\u5b50\u65cf\u3002<br \/>\n\u8d64\u8840\u7403\u9032\u5165\u95a2\u9023\u907a\u4f1d\u5b50\u3068\u5bbf\u4e3b\u57df\u3068\u306e\u95a2\u4fc2\u304c\u8208\u5473\u6df1\u3044\u3002<br \/>\n[\u30e1\u30bf\u30b2\u30ce\u30e0\u89e3\u6790\u304b\u3089\u898b\u3048\u308b\u4e0b\u5317\u534a\u5cf6\u6c96\u5730\u4e0b\u751f\u547d\u570f\u751f\u614b\u7cfb]<br \/>\n\u6d77\u5e951000m\u304f\u3089\u3044\u307e\u3067\u4f55\u30ab\u6240\u304b\u3067\u30dc\u30fc\u30ea\u30f3\u30b0\u3057\u3066\u3044\u308b\u30021cm^3 \u3042\u305f\u308a 10^6 \u301c 10^7 \u304f\u3089\u3044\u306e\u5fae\u751f\u7269\u304c\u3044\u308b\u3002<br \/>\n\u6df1\u5ea6\u304c\u6df1\u3044\u30b5\u30f3\u30d7\u30eb\u307b\u3069\u3068\u308c\u308b DNA \u91cf\u306f\u6e1b\u5c11\u3059\u308b\u304c\u3001rRNA \u306e\u7a2e\u985e\u306f\u3042\u307e\u308a\u304b\u308f\u3089\u306a\u3044? \u6df1\u3044\u307b\u3069\u591a\u69d8\u6027\u304c\u4e0a\u304c\u308b\u306e\u304b\u3082\u3002<br \/>\nCO2 \u304b\u3089 Acetyl-CoA \u307e\u3067\u6301\u3063\u3066\u3044\u304f\u5acc\u6c17\u7684\u306a\u4ee3\u8b1d\u56de\u8def\u3068\u304b\u304c\u63a8\u5b9a\u3067\u304d\u305f\u3002<br \/>\n\u6297\u9178\u5316\u30b7\u30b9\u30c6\u30e0\u3082\u9178\u7d20\u3092\u767a\u751f\u3057\u306a\u3044\u3001\u5acc\u6c17\u7684\u306a\u30d1\u30b9\u30a6\u30a7\u30a4\u306b\u95a2\u9023\u3059\u308b\u907a\u4f1d\u5b50\u304c\u591a\u6570\u3002<br \/>\n[\u30a4\u30cd\u5171\u751f\u7d30\u83cc\u306e\u7fa4\u8846\u69cb\u9020\u89e3\u6790]<br \/>\n\u30a4\u30cd\u79d1\u3068\u30de\u30e1\u79d1\u306e\u5171\u901a\u6027\u3068\u76f8\u9055\u6027\u306f\uff1f<br \/>\n\u690d\u7269\u306f\u30a8\u30f3\u30c9\u30d5\u30a1\u30a4\u30c8\u30fb\u30a8\u30d4\u30d5\u30a1\u30a4\u30c8\u30fb\u6839\u570f\u5fae\u751f\u7269\u3092\u5236\u5fa1\u3057\u3066\u3044\u308b\u306e\u3067\u306f\u306a\u3044\u304b\uff1f<br \/>\n\u30de\u30e1\u79d1\u3067\u306f\u6839\u7c92\u83cc\u5f62\u6210\u3001\u83cc\u6839\u5f62\u6210\u3092\u5236\u5fa1\u3059\u308b\u690d\u7269-\u5fae\u751f\u7269\u306e\u30b7\u30b0\u30ca\u30eb\u4f1d\u9054\u7cfb\u304c\u3042\u308a\u3001\u30a4\u30cd\u306b\u3082\u30db\u30e2\u30ed\u30b0\u304c\u5b58\u5728\u3057\u3066\u3044\u308b\u3002<br \/>\n\u30a4\u30cd\u306e CSP \u907a\u4f1d\u5b50\u578b\u306b\u4f9d\u5b58\u3059\u308b\u5c5e\u304c\u3042\u308b (\u52a3\u6027\u30db\u30e2\u3060\u3068\u83cc\u304c\u5897\u3048\u306a\u3044)\u3002<br \/>\n\u30a8\u30f3\u30c9\u30d5\u30a1\u30a4\u30c8\u3084\u6839\u570f\u5fae\u751f\u7269\u306e\u7d30\u80de\u3092\u3046\u307e\u304f\u6fc3\u7e2e\u3057\u3066\u3068\u3063\u3066\u304f\u308b\u65b9\u6cd5\u3092\u958b\u767a\u3002\u6fc3\u7e2e\u3057\u305f\u5834\u5408\u3068\u305d\u3046\u3067\u306a\u3044\u5834\u5408\u3067\u51fa\u3066\u304f\u308b\u30b0\u30eb\u30fc\u30d7\u304c\u3061\u3087\u3063\u3068\u9055\u3046\u3002\u3053\u308c\u306f\u3001\u571f\u58cc\u306b\u5f37\u304f attach \u3057\u3066\u3044\u308b\u3084\u3064\u306a\u3093\u304b\u304c\u571f\u58cc\u3068\u4e00\u7dd2\u306b\u843d\u3061\u308b\u304b\u3089\u3067\u306f\u306a\u3044\u304b\u3001\u3068\u306e\u3053\u3068\u3002\u3064\u307e\u308a\u3001scope \u306f\u9055\u3046\u3051\u3069\u4e21\u65b9\u6b63\u3057\u3044\u306e\u304b\u306a\u3002<br \/>\nrRNA \u3068 nifH (nitrogenase: \u7a92\u7d20\u56fa\u5b9a\u907a\u4f1d\u5b50) \u3067\u30b0\u30eb\u30fc\u30d4\u30f3\u30b0\u3002<br \/>\n\u6839\u307e\u3067\u5165\u308c\u308b\u3068\u5927\u5909\u306a\u306e\u3067\u5730\u4e0a\u90e8\u306e\u30e1\u30bf\u30b2\u30ce\u30e0\u3002<br \/>\n[\u9ad8\u6e29\u767a\u9175\u30b3\u30f3\u30dd\u30b9\u30c8\u53ca\u3073\u539f\u6599\u6c5a\u6ce5\u306e\u6700\u8fd1\u7fa4\u8846\u69cb\u9020\u89e3\u6790]<br \/>\n\u4e0b\u6c34\u6c5a\u6ce5\u306e\u4f59\u5270\u5206\u3092\u30b3\u30f3\u30dd\u30b9\u30c8\u5316\u3059\u308b\u65b9\u6cd5\u304c\u3068\u3089\u308c\u306f\u3058\u3081\u3066\u3044\u308b\u3002\u9ad8\u6e29\u5806\u80a5\u5316\u6cd5 (80\u5ea6\u4ee5\u4e0a\u3067\u767a\u9175\u3055\u305b\u308b!)\u3002\u9ad8\u5ea6\u597d\u71b1\u83cc\u306e\u95a2\u4e0e\u304c\u3042\u308a\u305d\u3046\u3002<br \/>\n\u9ad8\u5206\u5b50\u6c5a\u6ce5\u3001\u6d88\u5316\u6c5a\u6ce5\u3001\u77f3\u7070\u51e6\u7406\u6c5a\u6ce5\u3067\u306f\u5acc\u6c17\u6027\u306e\u83cc\u304c\u591a\u3044\u304c\u3001\u30b3\u30f3\u30dd\u30b9\u30c8\u3067\u306f\u597d\u6c17\u6027\u306e\u304c\u591a\u3044\u306e\u3067\u3001\u9ad8\u6e29\u767a\u9175\u306e\u3068\u3053\u308d\u3067\u5927\u304d\u304f\u5909\u308f\u308b\u306e\u304b\u3082\u3002\u305f\u3060\u3057\u3001\u51fa\u3066\u304d\u305f\u306e\u306f\u4e2d\u7b49\u5ea6\u597d\u71b1\u83cc\u3067\u3001\u9ad8\u5ea6\u597d\u71b1\u83cc\u306f\u898b\u3064\u304b\u3089\u306a\u304b\u3063\u305f\u304c\u3001\u3053\u308c\u306f\u5b9f\u9a13\u306e sensitivity \u304c\u4f4e\u3044\u304b\u3089\u304b\u3001\u3042\u308b\u3044\u306f\u5206\u985e\u304c\u60aa\u304f\u3066\u5b9f\u969b\u306b\u306f\u4e2d\u7b49\u5ea6\u3067\u306f\u306a\u304f\u9ad8\u5ea6\u597d\u71b1\u83cc\u306a\u306e\u304b\u3082\u3002<br \/>\n[\u5927\u8178\u83cc\u591a\u91cd\u907a\u4f1d\u5b50\u6b20\u640d\u682a\u306e\u89e3\u6790\u306b\u3088\u3063\u3066\u660e\u3089\u304b\u306b\u306a\u3063\u305f\u4e2d\u5fc3\u70ad\u7d20\u4ee3\u8b1d\u306e\u65b0\u7d4c\u8def]<br \/>\n\u4e2d\u5fc3\u70ad\u7d20\u4ee3\u8b1d\u56de\u8def\u306e70\u907a\u4f1d\u5b50\u4e2d\u3001\u5fc5\u9808\u306a\u306e\u306f (glucose \u304c\u70ad\u7d20\u6e90\u306e\u5834\u5408) 4\u907a\u4f1d\u5b50\u3060\u3051\u3002<br \/>\n\u30d0\u30a4\u30d1\u30b9\u304c\u3044\u308d\u3044\u308d\u3042\u308a\u305d\u3046\u3002wet \u5b9f\u9a13\u3068\u540c\u3058\u3053\u3068\u3092\u8a08\u7b97\u6a5f\u30b7\u30df\u30e5\u30ec\u30fc\u30b7\u30e7\u30f3\u3067\u3082\u5b9f\u65bd\u3002<br \/>\n\u3075\u3080\u3080\u3002dry \u306e\u307b\u3046\u306f\u305d\u3053\u307e\u3067\u30e2\u30c7\u30ea\u30f3\u30b0\u3067\u304d\u308b\u3082\u306e\u304b\u306a\uff1f<br \/>\n[\u534a\u5b9a\u91cf\u7684\u767a\u73fe\u30d7\u30ed\u30c6\u30aa\u30df\u30af\u30b9\u306b\u3088\u308b\u82b3\u9999\u65cf\u5206\u89e3\u306e\u4ee3\u8b1d\u7d4c\u8def\u89e3\u6790]<br \/>\n\u30e9\u30d9\u30eb\u30d5\u30ea\u30fc\u6cd5\u3001\u3068\u3044\u3046\u306e\u3067\u30bf\u30f3\u30d1\u30af\u8cea\u5b9a\u91cf (MS\/MS \u30b9\u30da\u30af\u30c8\u30eb\u306e\u6570\u3092\u4f7f\u3046) \u3092\u884c\u3044\u3001\u30b5\u30f3\u30d7\u30eb\u9593\u6bd4\u8f03\u3002emPAI \u3068\u3044\u3046\u6307\u6570\u3092\u4f7f\u3063\u3066\u3001\u30bf\u30f3\u30d1\u30af\u8cea\u6df7\u5408\u7269\u4e2d\u306b\u305d\u308c\u305e\u308c\u306e\u30bf\u30f3\u30d1\u30af\u8cea\u304c\u3069\u306e\u304f\u3089\u3044\u306e\u91cf\u3067\u5b58\u5728\u3057\u3066\u3044\u308b\u304b\u3092\u76f8\u5bfe\u7684\u306b\u77e5\u308b\u3053\u3068\u304c\u3067\u304d\u308b\u534a\u5b9a\u91cf\u6cd5\u3002<br \/>\nPseudomonas putida F1 \u3092\u4f7f\u7528\u30025.96Mbp, 5250proteins. \u30d9\u30f3\u30bc\u30f3\u3001\u30c8\u30eb\u30a8\u30f3\u3001\u30a8\u30c1\u30eb\u30d9\u30f3\u30bc\u30f3\u306a\u3069\u3092\u5206\u89e3\u3067\u304d\u308b\u3002<br \/>\n\u3069\u3093\u306a\u82b3\u9999\u65cf\u3092\u5165\u308c\u308b\u304b\u30fb\u5165\u308c\u306a\u3044\u304b\u3067\u767a\u73fe\u304c\u5909\u308f\u308b\u69d8\u5b50\u3092\u6e2c\u5b9a\u3002\u30b2\u30ce\u30e0\u4e0a\u306e\u3069\u3053\u306e\u30bf\u30f3\u30d1\u30af\u8cea\u304c\u51fa\u3066\u308b\u304b\u3092\u898b\u3089\u308c\u308b\u306e\u3063\u3066\u9762\u767d\u3044\u306a\u30fc\u3002<br \/>\n[\u30c8\u30ea\u30b3\u30b9\u30bf\u30c1\u30f3A\u51e6\u7406\u306e Aspergillus fumigatus \u306b\u304a\u3051\u308b\u30b2\u30ce\u30e0\u30ef\u30a4\u30c9\u30cc\u30af\u30ec\u30aa\u30bd\u30fc\u30e0\u30de\u30c3\u30d7\u89e3\u6790]<br \/>\nTSA treated \/ untreated \u3067\u30d2\u30b9\u30c8\u30f3\u8131\u30a2\u30bb\u30c1\u30eb\u5316\u9175\u7d20\u306b\u767a\u73fe\u3092\u307f\u308b\u3068\u3001treat \u3057\u305f\u307b\u3046\u304c\u305f\u304f\u3055\u3093\u51fa\u3066\u3044\u308b\u3002\u305d\u306e\u307b\u304b\u306e\u30d2\u30b9\u30c8\u30f3\u95a2\u4fc2\u306e\u907a\u4f1d\u5b50\u3082\u307f\u3066\u307f\u305f\u3002<br \/>\nTSA treatment \u306b\u3088\u3063\u3066\u30d2\u30b9\u30c8\u30f3\u306b\u5dfb\u304d\u4ed8\u304f\u9577\u3055\u304c\u5897\u3048\u308b\u3002\u30d7\u30ed\u30e2\u30fc\u30bf\u306e\u3068\u3053\u308d\u3067\u306f\u4f4d\u7f6e\u304c\u91cd\u8981\u3067\u3001\u30dc\u30c7\u30a3\u3067\u306f\u305d\u3046\u3067\u3082\u306a\u3044\uff1f<br \/>\n[\u5927\u898f\u6a21\u306a\u9006\u4f4d\u306b\u3088\u308b\u67d3\u8272\u4f53\u518d\u7de8\u3092\u5229\u7528\u3057\u305f\u67d3\u8272\u4f53\u6a5f\u80fd\u9818\u57df\u306e\u89e3\u6790]<br \/>\n\u8907\u88fd\u7d42\u4e86\u9818\u57df\u304c\u7d30\u80de\u5206\u88c2\u6642\u306e\u67d3\u8272\u4f53\u5206\u914d\u306b\u975e\u5e38\u306b\u91cd\u8981\u3067\u3042\u308b\u3053\u3068\u3092\u767a\u898b\uff01<br \/>\n\u8907\u88fd\u958b\u59cb\u70b9\u306f\u4e21\u5c40\u306b\u79fb\u52d5\u3057\u3001\u7d42\u4e86\u9818\u57df (Ter domain) \u306f\u7d30\u80de\u4e2d\u592e\u306b\u5c40\u5728\u3059\u308b\u304c\u3001\u5f8c\u8005\u306f\u305f\u3060\u5f15\u3063\u5f35\u3089\u308c\u3066\u3044\u308b\u3068\u601d\u308f\u308c\u3066\u304d\u305f\u3002<br \/>\n\u5909\u7570\u682a\u3067 Ter domain \u3092\u5206\u65ad\u3059\u308b\u3068\u67d3\u8272\u4f53\u5206\u914d\u80fd\u304c\u5931\u308f\u308c\u3001\u67d3\u8272\u4f53\u3092\u6301\u305f\u306a\u3044\u7121\u6838\u306e\u7d30\u80de\u304c\u9ad8\u983b\u5ea6\u306b\u751f\u3058\u308b\u3002<br \/>\n[\u975e\u5206\u5316\u6027\u306e\u793e\u4f1a\u6027\u30a2\u30e1\u30fc\u30d0Acytostelium\u306e\u907a\u4f1d\u5b50\u89e3\u6790]<br \/>\n\u690d\u7269\u3067\u3082\u52d5\u7269\u3067\u3082\u83cc\u985e\u3067\u3082\u3042\u308a\u307e\u305b\u3093\u3002<br \/>\n\u6982\u306d\u6628\u65e5\u304a\u4f3a\u3044\u3057\u305f\u3068\u304a\u308a\u3067\u3001\u6301\u3063\u3066\u3044\u308b\u907a\u4f1d\u5b50\u306f\u3060\u3044\u305f\u3044\u540c\u3058\u3060\u3051\u3069\u91cd\u8907\u907a\u4f1d\u5b50\u306e\u6570\u304c\u9055\u3046\u306e\u3067\u3001\u305d\u306e\u3078\u3093\u306b\u6ce8\u76ee\u3057\u3066\u3044\u308b\u3088\u3001\u3068\u306e\u3053\u3068\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>[\u6b21\u4e16\u4ee3\u30b7\u30fc\u30b1\u30f3\u30b5\u306b\u3088\u308b\u65b0\u898f\u30de\u30e9\u30ea\u30a2\u539f\u866b\u30b2\u30ce\u30e0\u306e\u89e3\u8aad] &#8211; P.falciparum (\u71b1\u5e2f\u71b1\u30de\u30e9\u30ea\u30a2) &#8211; P.vivax (\u4e09\u65e5\u71b1\u30de\u30e9\u30ea\u30a2) \u85ac\u5264\u8010\u6027\u306e\u304c\u51fa\u73fe\u3002P.cynomolgi, P.k &hellip; <a href=\"https:\/\/yasu2.prosou.nu\/blog\/index.php\/2010\/03\/17\/2559\/\" class=\"more-link\"><span class=\"screen-reader-text\">&#8220;SGMJ 2010: Day 3&#8221; \u306e<\/span>\u7d9a\u304d\u3092\u8aad\u3080<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":4,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":""},"categories":[10],"tags":[],"class_list":["post-2559","post","type-post","status-publish","format-standard","hentry","category-conference-logs"],"_links":{"self":[{"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/posts\/2559","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/comments?post=2559"}],"version-history":[{"count":0,"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/posts\/2559\/revisions"}],"wp:attachment":[{"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/media?parent=2559"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/categories?post=2559"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/yasu2.prosou.nu\/blog\/index.php\/wp-json\/wp\/v2\/tags?post=2559"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}